5F0P
Structure of retromer VPS26-VPS35 subunits bound to SNX3 and DMT1(L557M) (SeMet labeled)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I02 |
| Synchrotron site | Diamond |
| Beamline | I02 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2015-04-23 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.97895 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 371.290, 75.320, 57.270 |
| Unit cell angles | 90.00, 97.66, 90.00 |
Refinement procedure
| Resolution | 56.760 - 2.780 |
| R-factor | 0.2209 |
| Rwork | 0.219 |
| R-free | 0.26050 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5f0l |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.135 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 56.761 | 56.761 | 2.940 |
| High resolution limit [Å] | 2.770 | 8.230 | 2.770 |
| Rmerge | 0.066 | 0.024 | 0.904 |
| Rmeas | 0.078 | 0.029 | 1.073 |
| Total number of observations | 271917 | ||
| Number of reflections | 77507 | 2941 | 12013 |
| <I/σ(I)> | 12.17 | 44.87 | 1.33 |
| Completeness [%] | 99.1 | 99.1 | 95.3 |
| CC(1/2) | 0.999 | 0.999 | 0.808 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6 | 291 | 0.8 M AmSO4, 0.1 M MES pH 6.0, 10% Glycerol |






