5ES5
Crystal structure of the initiation module of LgrA in the "open" and "closed " adenylation states
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 200 |
Detector technology | CCD |
Collection date | 2015-05-12 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.979 |
Spacegroup name | H 3 |
Unit cell lengths | 278.844, 278.844, 82.831 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.050 - 2.800 |
R-factor | 0.2285 |
Rwork | 0.227 |
R-free | 0.26310 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5es6 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.544 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.050 | 50.000 | 2.850 |
High resolution limit [Å] | 2.800 | 7.590 | 2.800 |
Rmerge | 0.056 | 0.020 | |
Rmeas | 0.062 | 0.023 | |
Rpim | 0.035 | 0.012 | 0.785 |
Total number of observations | 231403 | ||
Number of reflections | 59121 | ||
<I/σ(I)> | 10.4 | ||
Completeness [%] | 99.9 | 99.6 | 100 |
Redundancy | 3.9 | 3.9 | 3.8 |
CC(1/2) | 0.999 | 0.510 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 0.92 M AmSO4, 0.1 M bis-Tris pH 5.5, 1% PEG 3350 |