5EQZ
Crystal structure of a Rev protein from Borrelia burgdorferi at 1.80 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E+ SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-09-25 |
Detector | RIGAKU SATURN 944+ |
Wavelength(s) | 1.5418 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 63.970, 42.510, 64.140 |
Unit cell angles | 90.00, 109.21, 90.00 |
Refinement procedure
Resolution | 50.000 - 1.800 |
R-factor | 0.2071 |
Rwork | 0.203 |
R-free | 0.24210 |
Structure solution method | SAD |
RMSD bond length | 0.006 |
RMSD bond angle | 0.716 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.850 |
High resolution limit [Å] | 1.800 | 8.050 | 1.800 |
Rmerge | 0.030 | 0.018 | 0.519 |
Rmeas | 0.032 | 0.019 | 0.578 |
Total number of observations | 101069 | ||
Number of reflections | 15025 | 179 | 1053 |
<I/σ(I)> | 34.87 | 98.46 | 3.49 |
Completeness [%] | 98.2 | 96.8 | 92.5 |
Redundancy | 6.7 | 4.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 290 | native crystal, MCSG1 condition F03: 20% PEG 3350,0.2 M Ammonium Citrate Dibasic, pH 5.0, BobuA.18943.a.B2.PS02467 at 19.33 mg/ml, cryo 20% EG, tray 266003F3, puck pla5-11. Iodide data set,JCSG+ condition A03: 20% Peg 3350, 200 mM Ammonium Citrate Tribasic, BobuA.18943.a.B2.PS02467 at 19.33 mg/ml, cryo 30% EG, 1.5 M NaI, tray 266002A3, puck pla5-6 |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 290 | native crystal, MCSG1 condition F03: 20% PEG 3350,0.2 M Ammonium Citrate Dibasic, pH 5.0, BobuA.18943.a.B2.PS02467 at 19.33 mg/ml, cryo 20% EG, tray 266003F3, puck pla5-11. Iodide data set,JCSG+ condition A03: 20% Peg 3350, 200 mM Ammonium Citrate Tribasic, BobuA.18943.a.B2.PS02467 at 19.33 mg/ml, cryo 30% EG, 1.5 M NaI, tray 266002A3, puck pla5-6 |