Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5EMK

Crystal structure of PRMT5:MEP50 with Compound 9 and sinefungin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2012-08-03
DetectorMAR scanner 300 mm plate
Wavelength(s)1.07816
Spacegroup nameI 2 2 2
Unit cell lengths102.790, 137.750, 178.520
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution54.490 - 2.520
R-factor0.2035
Rwork0.200
R-free0.26180
RMSD bond length0.010
RMSD bond angle1.492
Data reduction softwareiMOSFLM
Data scaling softwareAimless (0.1.27)
Refinement softwareREFMAC (5.7.0029)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]54.63054.6302.590
High resolution limit [Å]2.52011.2702.520
Rmerge0.0550.0210.674
Rpim0.0250.0100.310
Total number of observations239412251317734
Number of reflections42869
<I/σ(I)>19.454.52.4
Completeness [%]99.498.698.7
Redundancy5.64.85.7
CC(1/2)0.9990.9990.884
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.2 M Sodium acetate, 0.1 M Sodium citrate pH 6.1, 10% w/v PEG 4000

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon