5ELC
Cholera toxin El Tor B-pentamer in complex with Lewis-y
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-10-22 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.965 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 63.667, 80.916, 95.770 |
Unit cell angles | 90.00, 96.07, 90.00 |
Refinement procedure
Resolution | 47.620 - 1.500 |
R-factor | 0.22332 |
Rwork | 0.221 |
R-free | 0.25956 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3chb |
RMSD bond length | 0.015 |
RMSD bond angle | 1.956 |
Data reduction software | XDS (January 10, 2014) |
Data scaling software | XDS (January 10, 2014) |
Phasing software | MOLREP (11.2.08; 09.12.2013) |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.620 | 1.590 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.064 | 0.625 |
Number of reflections | 146071 | |
<I/σ(I)> | 9.2 | 1.34 |
Completeness [%] | 94.4 | 85.2 |
Redundancy | 2.6 | 2.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 0.1 M Bicine-Tris, 12.5% PEG1000, 12.5% PEG3350, 12.5% MPD, 0.03 M calcium chloride, 0.03 M magnesium chloride |