5EKY
Crystal structure of deoxyribose-phosphate aldolase from Escherichia coli (K58E-Y96W mutant)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-07-25 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 110.790, 53.360, 37.840 |
Unit cell angles | 90.00, 98.30, 90.00 |
Refinement procedure
Resolution | 47.979 - 1.100 |
R-factor | 0.1223 |
Rwork | 0.121 |
R-free | 0.14360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1jcl |
RMSD bond length | 0.010 |
RMSD bond angle | 1.187 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.979 | 1.130 | |
High resolution limit [Å] | 1.100 | 4.920 | 1.100 |
Rmerge | 0.052 | 0.049 | 0.399 |
Rmeas | 0.064 | 0.060 | 0.494 |
Total number of observations | 228749 | ||
Number of reflections | 86053 | 978 | 6200 |
<I/σ(I)> | 9.78 | 28.37 | 2.17 |
Completeness [%] | 97.4 | 93.6 | 95 |
Redundancy | 2.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | PEG 4000, 2-propanol, HEPES buffer |