5EKQ
The structure of the BamACDE subcomplex from E. coli
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-08-19 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1.0 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 234.848, 109.231, 103.988 |
Unit cell angles | 90.00, 95.04, 90.00 |
Refinement procedure
Resolution | 29.914 - 3.392 |
R-factor | 0.2405 |
Rwork | 0.238 |
R-free | 0.28110 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB IDs 3TGO 4C4V 3Q6B 2KM7 3EFC |
RMSD bond length | 0.003 |
RMSD bond angle | 0.973 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10_2142: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.520 |
High resolution limit [Å] | 3.392 | 7.320 | 3.392 |
Rmerge | 0.119 | 0.062 | |
Rmeas | 0.129 | 0.068 | |
Rpim | 0.058 | 0.028 | 0.875 |
Total number of observations | 226289 | ||
Number of reflections | 36099 | ||
<I/σ(I)> | 5.8 | ||
Completeness [%] | 99.6 | 98.5 | 99.9 |
Redundancy | 6.3 | 5.7 | 6.4 |
CC(1/2) | 0.996 | 0.485 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 294 | 100 mM Tris-HCl, pH 8.5, 200 mM MgCl2, 10 mM MnCl2, and 8% PEG 4000 |