5EJF
Crystal structure of NAD kinase P101A mutant from Listeria monocytogenes
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-2 |
Synchrotron site | ESRF |
Beamline | ID14-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-09-16 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.933 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 67.042, 119.174, 67.593 |
Unit cell angles | 90.00, 100.98, 90.00 |
Refinement procedure
Resolution | 34.776 - 2.120 |
R-factor | 0.2145 |
Rwork | 0.212 |
R-free | 0.26850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2i1w |
RMSD bond length | 0.011 |
RMSD bond angle | 1.239 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.21) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 66.355 | 34.776 | 2.230 |
High resolution limit [Å] | 2.040 | 6.700 | 2.120 |
Rmerge | 0.052 | 0.633 | |
Rmeas | 0.119 | ||
Rpim | 0.048 | 0.023 | 0.294 |
Total number of observations | 351556 | 11537 | 45655 |
Number of reflections | 58778 | ||
<I/σ(I)> | 11.2 | 27.6 | 2.6 |
Completeness [%] | 99.6 | 99.4 | 98.5 |
Redundancy | 6 | 6.1 | 5.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.1 | 294 | 50 mM Sodium Bromide, 150 mM tri-sodium citrate dihydrate, 14-16% w/v polyethylene glycol 400 |