5EJ5
EcMenD-ThDP-Mn2+ complex soaked with 2-ketoglutarate for 1.5 h
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-12-09 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9792 |
Spacegroup name | P 1 |
Unit cell lengths | 90.760, 90.800, 170.100 |
Unit cell angles | 75.79, 83.29, 64.34 |
Refinement procedure
Resolution | 33.759 - 2.300 |
R-factor | 0.1857 |
Rwork | 0.183 |
R-free | 0.23430 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.141 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.280 | 2.340 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.101 | 0.240 |
Number of reflections | 194725 | |
<I/σ(I)> | 5.8 | 2.8 |
Completeness [%] | 92.4 | 95.5 |
Redundancy | 1.9 | 1.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 289 | 0.16 M magnesium formate, 1% tascimate pH 7.0, 0.02 M HEPES pH 7.0, 14% PEG 3350 and 2% PEG MME 5000 |