Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5EF2

RADIATION DAMAGE TO THE TRAP-RNA COMPLEX: DOSE (DWD) 21.9 MGy

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-4
Synchrotron siteESRF
BeamlineID14-4
Temperature [K]100
Detector technologyCCD
Collection date2010-05-08
DetectorADSC QUANTUM 315r
Wavelength(s)0.940
Spacegroup nameC 1 2 1
Unit cell lengths141.210, 111.160, 138.280
Unit cell angles90.00, 117.39, 90.00
Refinement procedure
Resolution59.685 - 1.980
R-factor0.2359
Rwork0.234
R-free0.26430
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5eeu
RMSD bond length0.024
RMSD bond angle2.276
Data reduction softwareMOSFLM
Data scaling softwareAimless (0.3.11)
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]62.69062.6902.010
High resolution limit [Å]1.98010.8401.980
Rmerge0.1280.0252.489
Rpim0.0780.0161.556
Total number of observations475519288321743
Number of reflections130982
<I/σ(I)>726.30.5
Completeness [%]99.395.297.9
Redundancy3.63.63.4
CC(1/2)0.9970.9980.267
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.8293.15Potassium phosphate,L-tryptophan,potassium glutamate,triethanolamine,MgCl2,monomethyl ether PEG 2000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon