5EB4
The crystal structure of almond HNL, PaHNL5 V317A, expressed in Aspergillus niger
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-05-29 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 68.880, 92.300, 97.590 |
Unit cell angles | 90.00, 93.73, 90.00 |
Refinement procedure
Resolution | 49.090 - 2.300 |
R-factor | 0.18954 |
Rwork | 0.186 |
R-free | 0.24704 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ju2 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.708 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.100 | 2.350 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.188 | 0.566 |
Number of reflections | 49502 | |
<I/σ(I)> | 6.6 | 2.5 |
Completeness [%] | 91.4 | 85.2 |
Redundancy | 5.3 | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | The initial protein concentration was 28 mg/ml (10mM L-Malic acid, MES, Tris pH 7). Different crystal forms were obtained under crystallization conditions varying - PEG 4K, isopropanol and 10mM Hepes pH 7-7.8 with protein concentration 19-28 mg/ml. Most of the crystals that appeared within 2 weeks had visual grow defects. In one of the drops the stack of thin plates appeared after 1 month and one complete dataset was collected. |