5E6T
Crystal structure of bovine norovirus P domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-09-03 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97924 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 112.920, 63.860, 87.560 |
Unit cell angles | 90.00, 115.06, 90.00 |
Refinement procedure
Resolution | 40.810 - 2.270 |
R-factor | 0.1971 |
Rwork | 0.195 |
R-free | 0.24120 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2zl5 |
RMSD bond length | 0.005 |
RMSD bond angle | 0.783 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.5.3) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.810 | 2.280 | |
High resolution limit [Å] | 2.200 | 9.830 | 2.200 |
Rmerge | 0.139 | 0.054 | 0.641 |
Rmeas | 0.155 | 0.060 | 0.756 |
Total number of observations | 144036 | ||
Number of reflections | 28691 | 346 | 1959 |
<I/σ(I)> | 10.53 | 28.73 | 2.79 |
Completeness [%] | 98.9 | 97.2 | 92.1 |
Redundancy | 5 | 4.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 291 | PEG 3350, Zinc acetate, imidazole |