5E5J
Joint X-ray/neutron structure of HIV-1 protease triple mutant (V32I,I47V,V82I) with darunavir at pH 6.0
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 293 |
Detector technology | IMAGE PLATE |
Collection date | 2014-08-20 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.540 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 59.724, 87.257, 46.547 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.000 - 2.000 |
Rwork | 0.217 |
R-free | 0.24500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4jec |
RMSD bond length | 0.008 |
RMSD bond angle | 1.000 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | nCNS (1.0.0) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.000 | 2.110 | 1.920 |
High resolution limit [Å] | 1.850 | 2.000 | 1.850 |
Rmerge | 0.048 | 0.267 | 0.478 |
Number of reflections | 21102 | ||
<I/σ(I)> | 26.5 | 3.2 | 2.8 |
Completeness [%] | 98.2 | 70.1 | 96.3 |
Redundancy | 3.9 | 5.2 | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | NaCl, MES | |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | NaCl, MES |