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5E5E

X-ray structure of the adduct formed in the reaction between RNase A and a neutral organometallic derivative [Pt(pbi)(Me)(DMSO)], pbi=2-(2'-pyridil)benzimidazole (compound 3)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyCCD
Collection date2015-03-18
DetectorRIGAKU SATURN 944+
Wavelength(s)1.5418
Spacegroup nameC 1 2 1
Unit cell lengths100.398, 32.768, 72.540
Unit cell angles90.00, 89.82, 90.00
Refinement procedure
Resolution72.500 - 1.980
R-factor0.1949
Rwork0.192
R-free0.25392
RMSD bond length0.013
RMSD bond angle1.582
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0049)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]72.5002.010
High resolution limit [Å]1.9801.980
Rmerge0.0870.408
Number of reflections16494
<I/σ(I)>4.8
Completeness [%]98.8
Redundancy3.43.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.1298RNase A crystals were grown by hanging drop vapor diffusion method using a reservoir solution containing 22-24 % (w/v) PEG4K, 10 mM sodium citrate pH 5.1-5.3. The crystals are monoclinic, space group C2, with two molecules in the asymmetric unit. The adduct was prepared by a three-days soaking in a solution that comprised the standard mother liquor used for the crystal growth to which a 2.5 mM solution of compound 3was added

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