5E3B
Structure of macrodomain protein from Streptomyces coelicolor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ELETTRA BEAMLINE 5.2R |
Synchrotron site | ELETTRA |
Beamline | 5.2R |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-05-12 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.976 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 103.819, 103.819, 33.254 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.430 - 1.600 |
R-factor | 0.1861 |
Rwork | 0.184 |
R-free | 0.22330 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2fg1 |
RMSD bond length | 0.023 |
RMSD bond angle | 2.252 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.12) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0124) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.430 | 46.430 | 1.630 |
High resolution limit [Å] | 1.600 | 8.770 | 1.600 |
Rmerge | 0.120 | 0.069 | 1.180 |
Rpim | 0.043 | 0.027 | 0.433 |
Total number of observations | 206585 | 1434 | 8611 |
Number of reflections | 24097 | ||
<I/σ(I)> | 11.5 | 25 | 1.8 |
Completeness [%] | 97.9 | 99.4 | 89.5 |
Redundancy | 8.6 | 7.1 | 8.1 |
CC(1/2) | 0.997 | 0.996 | 0.670 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 0.1 M Tris-HCl, 0.29 M sodium chloride, 1.0 M sodium citrate |