5E1O
Crystal structure of NTMT1 in complex with RPKRIA peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-07-10 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97921 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 107.450, 107.450, 206.388 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 84.810 - 2.000 |
R-factor | 0.1526 |
Rwork | 0.151 |
R-free | 0.18880 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | isomorphous crystal structure of same protein |
RMSD bond length | 0.019 |
RMSD bond angle | 1.823 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.12) |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 84.830 | 84.830 | 2.050 |
High resolution limit [Å] | 2.000 | 8.940 | 2.000 |
Rmerge | 0.171 | 0.046 | 0.880 |
Rmeas | 0.175 | 0.048 | 0.901 |
Rpim | 0.037 | 0.011 | 0.189 |
Total number of observations | 1038174 | 11293 | 76384 |
Number of reflections | 48256 | ||
<I/σ(I)> | 23 | 62.1 | 5 |
Completeness [%] | 99.9 | 99.5 | 99.7 |
Redundancy | 21.5 | 16.9 | 22.1 |
CC(1/2) | 0.999 | 0.999 | 0.939 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 26% PEG3350, 16% tacsimate |