5DY3
Crystal structure of Dbr2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-12-20 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 51.893, 80.797, 84.303 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.192 - 1.820 |
R-factor | 0.1555 |
Rwork | 0.153 |
R-free | 0.18940 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.000 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER (2.5.6) |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.850 |
High resolution limit [Å] | 1.820 | 4.940 | 1.820 |
Rmerge | 0.086 | 0.042 | 0.385 |
Rmeas | 0.092 | 0.046 | 0.415 |
Rpim | 0.034 | 0.018 | 0.154 |
Total number of observations | 234028 | ||
Number of reflections | 32510 | ||
<I/σ(I)> | 10 | ||
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 7.2 | 6.8 | 7.3 |
CC(1/2) | 0.993 | 0.947 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 278 | 0.1M Bis-Tris, 25% PEG3350 |