5DXY
Crystal structure of Dbr2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-12-20 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 51.682, 80.430, 84.438 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.382 - 1.770 |
R-factor | 0.1548 |
Rwork | 0.153 |
R-free | 0.18350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5dxx |
RMSD bond length | 0.006 |
RMSD bond angle | 1.038 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER (2.4.0) |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.800 |
High resolution limit [Å] | 1.770 | 4.800 | 1.770 |
Rmerge | 0.066 | 0.027 | 0.298 |
Total number of observations | 243177 | ||
Number of reflections | 34967 | ||
<I/σ(I)> | 15.7 | ||
Completeness [%] | 99.8 | 99.2 | 99.8 |
Redundancy | 7 | 6.7 | 6.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 278 | 0.1M Bis-Tris, 25% PEG3350 |