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5DXW

Crystal structure of mouse PD-L1 nanobody

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]100
Detector technologyCCD
Collection date2015-03-11
DetectorADSC QUANTUM 315r
Wavelength(s)1.075
Spacegroup nameP 21 21 2
Unit cell lengths85.191, 29.679, 35.268
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution18.230 - 1.441
R-factor0.1695
Rwork0.169
R-free0.19340
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1ol0
RMSD bond length0.006
RMSD bond angle1.067
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.8_1069)
Data quality characteristics
 Overall
Low resolution limit [Å]18.230
High resolution limit [Å]1.441
Number of reflections30989
<I/σ(I)>23.4
Completeness [%]99.3
Redundancy6.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5293PEG 400, ammonium sulfate, hepes

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