5DVR
Crystal Structure of TgCDPK1 From Toxoplasma Gondii complexed with GW780159X
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-07-10 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97921 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 47.960, 72.456, 65.671 |
Unit cell angles | 90.00, 98.22, 90.00 |
Refinement procedure
Resolution | 31.644 - 2.400 |
R-factor | 0.2338 |
Rwork | 0.230 |
R-free | 0.29900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ku2 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.140 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.15) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 72.460 | 72.460 | 2.490 |
High resolution limit [Å] | 2.400 | 8.980 | 2.400 |
Rmerge | 0.051 | 0.024 | 0.745 |
Rpim | 0.031 | 0.017 | 0.461 |
Total number of observations | 63430 | 827 | 5739 |
Number of reflections | 17270 | ||
<I/σ(I)> | 17 | 43 | 1.7 |
Completeness [%] | 98.6 | 76.7 | 92.4 |
Redundancy | 3.7 | 3 | 3.4 |
CC(1/2) | 0.999 | 0.997 | 0.705 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | PEG 3350, di Sodium-Tart |