5DUN
The crystal structure of OMe substituted twister ribozyme
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-02-23 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9792 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 46.819, 46.819, 143.751 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.517 - 2.640 |
R-factor | 0.1969 |
Rwork | 0.194 |
R-free | 0.25230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4rge |
RMSD bond length | 0.010 |
RMSD bond angle | 1.650 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 143.700 | 2.730 |
High resolution limit [Å] | 2.640 | 2.640 |
Rmerge | 0.183 | 1.611 |
Number of reflections | 5164 | |
<I/σ(I)> | 14.5 | |
Completeness [%] | 99.9 | 100 |
Redundancy | 2 | 2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 8 | 293 | 0.2 M Calcium acetate, 0.1 M Imidazole pH 8.0, 20% PEG 1000 |