Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5DQH

Crystal Structure of Human DNA Polymerase Eta Inserting dGMPNPP Opposite O4-Ethylthymidine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2014-10-19
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.97872
Spacegroup nameP 61
Unit cell lengths98.471, 98.471, 82.230
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution42.639 - 1.990
R-factor0.1637
Rwork0.161
R-free0.21030
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4o3n
RMSD bond length0.008
RMSD bond angle1.116
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.020
High resolution limit [Å]1.9901.990
Rmerge0.1390.997
Number of reflections30825
<I/σ(I)>19.922.31
Completeness [%]98.998.5
Redundancy11.410
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.52910.1 M MES pH 5.5, 5mM magnesium chloride, 22% PEG 2000 MME

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon