5DO2
Complex structure of MERS-RBD bound with 4C2 antibody
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-11-30 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 1.00000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 74.083, 110.401, 172.981 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.531 - 2.409 |
R-factor | 0.2468 |
Rwork | 0.245 |
R-free | 0.28910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4kr0 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.922 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.490 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.098 | 0.734 |
Number of reflections | 55049 | |
<I/σ(I)> | 19.915 | 2.092 |
Completeness [%] | 99.3 | 93.5 |
Redundancy | 7.2 | 6.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.2 M sodium thiocyanate, 20% (w/v) PEG 3350 |