5DNL
Crystal structure of IGPD from Pyrococcus furiosus in complex with (S)-C348
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04 |
| Synchrotron site | Diamond |
| Beamline | I04 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2012-05-23 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.97950 |
| Spacegroup name | I 4 2 2 |
| Unit cell lengths | 141.270, 141.270, 137.410 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 49.250 - 1.530 |
| R-factor | 0.13557 |
| Rwork | 0.135 |
| R-free | 0.14916 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2f1d |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.473 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0124) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 49.250 | 1.570 |
| High resolution limit [Å] | 1.530 | 1.530 |
| Rmerge | 0.080 | 0.688 |
| Number of reflections | 103816 | |
| <I/σ(I)> | 18.1 | 4.1 |
| Completeness [%] | 100.0 | 100 |
| Redundancy | 13.1 | 13.2 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6 | 290 | 0.1M MES buffer pH 6 and 10% MPD |
