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5DLE

Crystal structure from a domain (Thr161-F265) from fructose-specific iiabc component (Pts system) from Borrelia burgdorferi

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2015-07-24
DetectorRAYONIX MX-225
Wavelength(s)0.97872
Spacegroup nameP 1 21 1
Unit cell lengths39.950, 91.740, 80.670
Unit cell angles90.00, 101.33, 90.00
Refinement procedure
Resolution38.216 - 1.550
R-factor0.1621
Rwork0.161
R-free0.18570
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2r48 treated in MorDa
RMSD bond length0.012
RMSD bond angle1.167
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10_2142: ???))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.590
High resolution limit [Å]1.5506.9301.550
Rmerge0.0480.0230.511
Rmeas0.0530.0260.568
Total number of observations412988
Number of reflections802558895754
<I/σ(I)>18.3146.682.91
Completeness [%]97.191.694
Redundancy5.145.13
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5290Microlytic MCSG1 screen G4: 20% PEG 3350, 200mM K/Na tartrate; BobuA.18902.a.B2.PS02426 at 22.3mg/ml, cryo 15% EG; tray 265189g4, puck nvm2-3

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PDB entries from 2024-05-15

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