5DLE
Crystal structure from a domain (Thr161-F265) from fructose-specific iiabc component (Pts system) from Borrelia burgdorferi
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-07-24 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.97872 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 39.950, 91.740, 80.670 |
Unit cell angles | 90.00, 101.33, 90.00 |
Refinement procedure
Resolution | 38.216 - 1.550 |
R-factor | 0.1621 |
Rwork | 0.161 |
R-free | 0.18570 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2r48 treated in MorDa |
RMSD bond length | 0.012 |
RMSD bond angle | 1.167 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10_2142: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.590 |
High resolution limit [Å] | 1.550 | 6.930 | 1.550 |
Rmerge | 0.048 | 0.023 | 0.511 |
Rmeas | 0.053 | 0.026 | 0.568 |
Total number of observations | 412988 | ||
Number of reflections | 80255 | 889 | 5754 |
<I/σ(I)> | 18.31 | 46.68 | 2.91 |
Completeness [%] | 97.1 | 91.6 | 94 |
Redundancy | 5.14 | 5.13 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 290 | Microlytic MCSG1 screen G4: 20% PEG 3350, 200mM K/Na tartrate; BobuA.18902.a.B2.PS02426 at 22.3mg/ml, cryo 15% EG; tray 265189g4, puck nvm2-3 |