5DJU
Crystal structure of LOV2 (C450A) domain in complex with Zdk3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-04-02 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00005 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 74.240, 74.500, 81.910 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.252 - 2.100 |
R-factor | 0.2075 |
Rwork | 0.205 |
R-free | 0.25820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2WKQ and a homology model based on 1Q2N |
RMSD bond length | 0.008 |
RMSD bond angle | 1.073 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.200 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.119 | 0.374 |
Number of reflections | 26342 | |
<I/σ(I)> | 6.7 | 2.1 |
Completeness [%] | 96.9 | 88.3 |
Redundancy | 3 | 2.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 0.1 M citric acid pH 4.0, 1.0 M lithium chloride, 18% (w/v) PEG 6000 |