5DA5
Crystal structure of Rhodospirillum rubrum Rru_A0973
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-02-07 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.7311 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 98.184, 120.533, 140.250 |
Unit cell angles | 90.00, 95.36, 90.00 |
Refinement procedure
Resolution | 49.627 - 2.064 |
R-factor | 0.173 |
Rwork | 0.171 |
R-free | 0.20610 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3k6c |
RMSD bond length | 0.012 |
RMSD bond angle | 1.264 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.630 | 2.100 |
High resolution limit [Å] | 2.064 | 2.064 |
Rmerge | 0.123 | 0.790 |
Number of reflections | 395746 | |
<I/σ(I)> | 10.6 | 1.6 |
Completeness [%] | 99.2 | 88.6 |
Redundancy | 6.4 | 4.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 1 - 2 ul protein mixed with 1 ul well solution over 1 ml well solution. 0.14 M calcium acetate 15 % (w/v) PEG3350 |