Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5D5X

Crystal structure of Chaetomium thermophilum Skn7 with SSRE DNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-1
Synchrotron siteESRF
BeamlineMASSIF-1
Temperature [K]100
Detector technologyPIXEL
Collection date2014-11-05
DetectorDECTRIS PILATUS 2M
Wavelength(s)0.96500
Spacegroup nameC 1 2 1
Unit cell lengths73.733, 43.328, 88.780
Unit cell angles90.00, 92.78, 90.00
Refinement procedure
Resolution30.000 - 2.400
R-factor0.2311
Rwork0.228
R-free0.28880
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5d5w
RMSD bond length0.006
RMSD bond angle1.101
Data reduction softwareXDS
Data scaling softwareAimless (0.1.27)
Phasing softwareMOLREP
Refinement softwareREFMAC (5.7.0029)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]44.34044.3402.480
High resolution limit [Å]2.3908.9402.390
Rmerge0.0920.0510.793
Rpim0.0450.0260.411
Total number of observations5691810464906
Number of reflections11227
<I/σ(I)>10.526.51.7
Completeness [%]99.399.394
Redundancy5.14.44.5
CC(1/2)0.9970.9960.643
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.529325 % PEG-2000 MME, 0.1 M HEPES-NaOH pH 7.5

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon