5D5X
Crystal structure of Chaetomium thermophilum Skn7 with SSRE DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-11-05 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.96500 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 73.733, 43.328, 88.780 |
Unit cell angles | 90.00, 92.78, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.400 |
R-factor | 0.2311 |
Rwork | 0.228 |
R-free | 0.28880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5d5w |
RMSD bond length | 0.006 |
RMSD bond angle | 1.101 |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.27) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.340 | 44.340 | 2.480 |
High resolution limit [Å] | 2.390 | 8.940 | 2.390 |
Rmerge | 0.092 | 0.051 | 0.793 |
Rpim | 0.045 | 0.026 | 0.411 |
Total number of observations | 56918 | 1046 | 4906 |
Number of reflections | 11227 | ||
<I/σ(I)> | 10.5 | 26.5 | 1.7 |
Completeness [%] | 99.3 | 99.3 | 94 |
Redundancy | 5.1 | 4.4 | 4.5 |
CC(1/2) | 0.997 | 0.996 | 0.643 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 25 % PEG-2000 MME, 0.1 M HEPES-NaOH pH 7.5 |