Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5D5T

SeMet-labelled HcgC from Methanocaldococcus jannaschii in P1 space group

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2013-08-29
DetectorPSI PILATUS 6M
Wavelength(s)1.000
Spacegroup nameP 1
Unit cell lengths45.480, 76.990, 84.990
Unit cell angles108.09, 89.98, 105.38
Refinement procedure
Resolution42.837 - 2.400
R-factor0.2074
Rwork0.205
R-free0.25110
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5d4t
RMSD bond length0.004
RMSD bond angle0.840
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.0002.500
High resolution limit [Å]2.40012.0002.400
Rmerge0.0940.0470.415
Rmeas0.1110.0550.501
Total number of observations272312
Number of reflections789176388910
<I/σ(I)>9.5225.172.74
Completeness [%]95.896.494.3
Redundancy3.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.528122.5 % (w/v) PEP426, 90 mM HEPES-NaOH (pH 7.5), 45 mM magnesium chloride and 0.2 M 2,2,2-trifluoroethanol

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon