5D3J
First bromodomain of BRD4 bound to inhibitor XD33
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2012-12-19 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 39.290, 49.520, 58.150 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.600 - 1.700 |
R-factor | 0.17989 |
Rwork | 0.177 |
R-free | 0.20554 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.355 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA (3.3.21) |
Phasing software | PHASER (2.5.6) |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 32.600 | 1.740 |
High resolution limit [Å] | 1.650 | 1.650 |
Rmerge | 0.077 | 0.505 |
Number of reflections | 14195 | |
<I/σ(I)> | 10.3 | 2.2 |
Completeness [%] | 99.9 | 100 |
Redundancy | 3.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | PEG3350, Hepes, magnesium chloride |