Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5D1H

Crystal structure of the 16S rRNA (adenine(1408)-N(1))-methyltransferase W203A mutant from Catenulisporales acidiphilia

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2014-02-07
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths66.007, 84.112, 94.368
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution42.056 - 2.803
R-factor0.188
Rwork0.183
R-free0.23380
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4x1o
RMSD bond length0.003
RMSD bond angle0.754
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX (1.8.4_1496)
Refinement softwarePHENIX (1.8.4_1496)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.850
High resolution limit [Å]2.8002.800
Rmerge0.099
Number of reflections13446
<I/σ(I)>15.62.6
Completeness [%]92.592.4
Redundancy4.34
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.62930.2 M Ammonium Acetate, 0.1 M Sodium Acetate Trihydrate, 30% PEG

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon