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5D13

Third PDZ domain (PDZ3) of PSD-95 complexed with CFMOC-KKETEV peptide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X25
Synchrotron siteNSLS
BeamlineX25
Temperature [K]100
Detector technologyPIXEL
Collection date2014-03-06
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.1
Spacegroup nameH 3
Unit cell lengths84.940, 84.940, 210.192
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution36.499 - 2.151
R-factor0.2125
Rwork0.210
R-free0.25650
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1tp3
RMSD bond length0.010
RMSD bond angle1.190
Data reduction softwareMOSFLM (7.1.0)
Data scaling softwareAimless (0.2.17)
Phasing softwarePHASER (2.5.6)
Refinement softwarePHENIX (1.8.4)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]36.5002.220
High resolution limit [Å]2.1502.150
Rmerge0.0900.715
Rpim0.0360.339
Total number of observations20641113352
Number of reflections30723
<I/σ(I)>10.51.5
Completeness [%]100.099.9
Redundancy6.75
CC(1/2)0.9910.881
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.229520 mM HEPES 100 mM NaCl 1.8 M tri-sodium citrate

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PDB entries from 2024-11-06

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