5CYS
Structure of the enzyme-product complex resulting from TDG action on a GcaC mismatch
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL7-1 |
Synchrotron site | SSRL |
Beamline | BL7-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-04-23 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.28357 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 97.887, 53.804, 81.245 |
Unit cell angles | 90.00, 96.07, 90.00 |
Refinement procedure
Resolution | 32.840 - 2.450 |
R-factor | 0.1689 |
Rwork | 0.165 |
R-free | 0.22690 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.040 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.8) |
Refinement software | BUSTER (2.10.2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 32.840 | 32.850 | 2.550 |
High resolution limit [Å] | 2.450 | 8.820 | 2.450 |
Rmerge | 0.046 | ||
Rpim | 0.023 | 1.630 | |
Total number of observations | 1670 | 8057 | |
Number of reflections | 15396 | ||
<I/σ(I)> | 18.9 | 0.6 | |
Completeness [%] | 98.1 | 96.9 | |
Redundancy | 4.7 | 4.7 | |
CC(1/2) | 0.999 | 0.338 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 298 | 30% PEG 4000, 0.2M ammonium acetate, 0.1M sodium acetate |