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5CPQ

Disproportionating enzyme 1 from Arabidopsis - apo form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyCCD
Collection date2011-08-11
DetectorADSC QUANTUM 315
Wavelength(s)0.9763
Spacegroup nameP 1
Unit cell lengths70.650, 74.220, 79.700
Unit cell angles64.97, 69.48, 66.02
Refinement procedure
Resolution57.780 - 2.130
R-factor0.1884
Rwork0.187
R-free0.21820
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1x1n
RMSD bond length0.012
RMSD bond angle1.401
Data reduction softwareXDS
Data scaling softwareSCALA (3.3.16)
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.073)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]70.51557.3952.240
High resolution limit [Å]2.1266.7202.130
Rmerge0.0390.541
Rmeas0.106
Rpim0.0630.0290.404
Total number of observations181754616023984
Number of reflections68185
<I/σ(I)>6.7151.7
Completeness [%]92.696.684.4
Redundancy2.72.72.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP82931 microliter of 9% PEG2000 MME in 0.1 M HEPES-NaOH, pH 8.0 was added to 1 microliter of protein at a concentration of 10 mg/ml in 20 mM HEPES-NaOH, pH 7.5, 150 mM NaCl

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PDB entries from 2024-11-06

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