5CDV
Proline dipeptidase from Deinococcus radiodurans R1
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | RRCAT INDUS-2 BEAMLINE PX-BL21 |
| Synchrotron site | RRCAT INDUS-2 |
| Beamline | PX-BL21 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2013-08-08 |
| Detector | MARMOSAIC 225 mm CCD |
| Wavelength(s) | 0.97947 |
| Spacegroup name | P 43 21 2 |
| Unit cell lengths | 60.619, 60.619, 202.784 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 39.480 - 1.450 |
| R-factor | 0.1825 |
| Rwork | 0.182 |
| R-free | 0.19780 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3q6d |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.291 |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 39.480 | 1.450 |
| High resolution limit [Å] | 1.450 | 1.450 |
| Rmerge | 0.048 | 0.187 |
| Number of reflections | 67571 | |
| <I/σ(I)> | 24.5 | 5.7 |
| Completeness [%] | 99.1 | 90.3 |
| Redundancy | 6.2 | 3.3 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | MICROBATCH | 5 | 293 | 0.1M HEPES pH 7.5, 0.8M NaH2PO4, 0.8M KH2PO4, 10mM Tris-Cl pH 8.0, 100mM NaCl |
