5CAG
Crystal structure of a putative adhesin (BACOVA_02677) from Bacteroides ovatus ATCC 8483 at 3.00 A resolution (PSI Community Target, Nakayama)
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-07-28 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9116,0.9794,0.9792 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 98.391, 98.391, 217.037 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.195 - 3.000 |
R-factor | 0.1861 |
Rwork | 0.185 |
R-free | 0.20740 |
Structure solution method | MAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.270 |
Data reduction software | XDS |
Data scaling software | XSCALE (January 10, 2014 BUILT=20140307) |
Phasing software | SHELX |
Refinement software | BUSTER (2.10.2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.195 | 3.110 | |
High resolution limit [Å] | 3.000 | 6.630 | 3.000 |
Rmerge | 0.092 | 0.033 | 1.378 |
Rmeas | 0.098 | 0.035 | 1.456 |
Total number of observations | 125002 | ||
Number of reflections | 13098 | 1379 | 1303 |
<I/σ(I)> | 18.18 | 49.2 | 1.6 |
Completeness [%] | 99.8 | 99.1 | 100 |
Redundancy | 9.491 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 10.5 | 277 | 0.2000M lithium sulfate, 2.0000M ammonium sulfate, 0.1M CAPS pH 10.5 |