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5C5T

The crystal structure of viral collagen prolyl hydroxylase vCPH from Paramecium Bursaria Chlorella virus-1 - 2OG complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2012-12-14
DetectorDECTRIS PILATUS 2M
Wavelength(s)0.92
Spacegroup nameP 1 21 1
Unit cell lengths33.790, 156.950, 41.240
Unit cell angles90.00, 90.02, 90.00
Refinement procedure
Resolution28.427 - 1.598
R-factor0.1787
Rwork0.177
R-free0.21120
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2jig
RMSD bond length0.016
RMSD bond angle1.483
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (dev_1977)
Data quality characteristics
 Overall
Low resolution limit [Å]28.430
High resolution limit [Å]1.598
Number of reflections55206
<I/σ(I)>13.55
Completeness [%]98.0
Redundancy3.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52770.1 M [Imidazole; MES monohydrate (acid)], 0.1 M amino acids [0.2 M L-Na-Glutamate; 0.2 M Alanine (racemic); 0.2 M Glycine; 0.2M Lysine HCL (racemic); 0.2 M Serine (racemic)], 30 % PEGMME 550 PEG 20K pH 6.5 [Morpheus HT96 condition H1, Molecular Dimensions] COmplex generated by soaking crystals in mother liquor supplemented with 250 mM ZnSO4 and 100 mM 2-OG for a period of 16 hours.

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