5C0P
The crystal structure of endo-arabinase from Bacteroides thetaiotaomicron VPI-5482
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-10-25 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97918 |
Spacegroup name | P 43 |
Unit cell lengths | 83.804, 83.804, 43.366 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.133 - 1.532 |
R-factor | 0.1498 |
Rwork | 0.149 |
R-free | 0.16380 |
Structure solution method | SAD |
RMSD bond length | 0.006 |
RMSD bond angle | 1.161 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | MLPHARE |
Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.560 |
High resolution limit [Å] | 1.530 | 1.530 |
Rmerge | 0.078 | 0.486 |
Number of reflections | 45139 | |
<I/σ(I)> | 18.7 | 1.3 |
Completeness [%] | 99.2 | 88.8 |
Redundancy | 3.7 | 2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 286 | 0.16M MgCl2, 0.08M Tris:HCl, 24% (w/v) PEG4000, 15(v/v)Glycerol |