5C0J
HLA-A02 carrying RQFGPDWIVA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-03-08 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 56.290, 80.130, 56.950 |
Unit cell angles | 90.00, 115.81, 90.00 |
Refinement procedure
Resolution | 42.830 - 1.640 |
R-factor | 0.1813 |
Rwork | 0.179 |
R-free | 0.21430 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3utq |
RMSD bond length | 0.020 |
RMSD bond angle | 1.964 |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.16) |
Phasing software | PHASER (2.5.6) |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.830 | 42.830 | 1.690 |
High resolution limit [Å] | 1.640 | 7.350 | 1.640 |
Rmerge | 0.064 | 0.029 | 0.867 |
Rpim | 0.039 | 0.017 | 0.538 |
Total number of observations | 198934 | 2318 | 14473 |
Number of reflections | 55141 | ||
<I/σ(I)> | 11.7 | 31.8 | 1.8 |
Completeness [%] | 99.6 | 97 | 99.9 |
Redundancy | 3.6 | 3.6 | 3.6 |
CC(1/2) | 0.997 | 0.998 | 0.658 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.2M sodium sulphate, 0.1M BIS TRIS propane, pH 6.5, 20% PEG 3350 |