5BZH
Crystal structure of the murine CD44 hyaluronan binding domain complex with a small molecule
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-11-12 |
Detector | RIGAKU SATURN 944+ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 30.850, 81.720, 32.120 |
Unit cell angles | 90.00, 117.97, 90.00 |
Refinement procedure
Resolution | 8.720 - 1.950 |
R-factor | 0.1732 |
Rwork | 0.170 |
R-free | 0.22710 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.013 |
RMSD bond angle | 1.377 |
Data scaling software | XSCALE |
Phasing software | PHASER (2.1.4) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 8.720 | 2.000 | |
High resolution limit [Å] | 1.950 | 8.720 | 1.950 |
Rmerge | 0.017 | 0.013 | 0.033 |
Rmeas | 0.020 | 0.016 | 0.040 |
Total number of observations | 37452 | ||
Number of reflections | 9978 | 114 | 722 |
<I/σ(I)> | 56.83 | 89.38 | 33.96 |
Completeness [%] | 96.3 | 91.2 | 93.5 |
Redundancy | 3.753 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | 30% PEG MME 5000, 100 mM MES, 200 mM (NH4)2SO4 |