5BZ5
Crystal structure of the RNA-binding domain of yeast Puf5p bound to AMN1 RNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-06-27 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.0 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 105.852, 105.852, 168.404 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.509 - 2.800 |
R-factor | 0.2071 |
Rwork | 0.201 |
R-free | 0.25850 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.674 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.850 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmerge | 0.094 | 0.568 |
Number of reflections | 13482 | |
<I/σ(I)> | 20 | 2 |
Completeness [%] | 93.7 | 91.7 |
Redundancy | 6.9 | 4.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.6 | 293 | PEG3350, CBTP |