5BVL
Crystal structure of a de novo designed TIM-barrel
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-11-02 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00000 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 50.080, 50.080, 131.280 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.790 - 1.992 |
R-factor | 0.2254 |
Rwork | 0.224 |
R-free | 0.26070 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Rosetta backbone model |
RMSD bond length | 0.013 |
RMSD bond angle | 1.215 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.790 | 2.064 |
High resolution limit [Å] | 1.992 | 1.992 |
Rmerge | 0.058 | 0.661 |
Number of reflections | 11894 | |
<I/σ(I)> | 15.24 | 1.79 |
Completeness [%] | 98.3 | 93.2 |
Redundancy | 5.86 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 5.5 | 293 | 25% PEG 3350, 0.2M magnesium chloride hexahydrate, 0.1M bis-tris |