5BUQ
Unliganded Form of O-succinylbenzoate Coenzyme A Synthetase (MenE) from Bacillus Subtilis, Solved at 1.98 Angstroms
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-04-03 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.973 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 82.780, 76.910, 93.870 |
Unit cell angles | 90.00, 114.93, 90.00 |
Refinement procedure
Resolution | 33.270 - 1.980 |
R-factor | 0.1624 |
Rwork | 0.161 |
R-free | 0.19970 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3IPL(N-domain of S. aureus MenE) chainA |
RMSD bond length | 0.007 |
RMSD bond angle | 0.999 |
Data reduction software | iMOSFLM (Version 6.4.0) |
Phasing software | PHENIX (1.8.4_1496) |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 33.270 | 2.051 |
High resolution limit [Å] | 1.980 | 1.980 |
Rmerge | 0.048 | 0.204 |
Number of reflections | 73620 | |
<I/σ(I)> | 22.06 | 9.05 |
Completeness [%] | 98.8 | 99.15 |
Redundancy | 1.9 | 1.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.15 | 293 | 8.1% (w/v) PEG8000, 0.09M cacodylate/HCl pH 6.15, 0.144M calcium acetate, 12.6% glycerol with additive agent of 0.049M sodium phosphate monobasic and 0.091M Potassium phosphate dibasic |