5BOK
Ferredoxin component of 3-nitrotoluene dioxygenase from Diaphorobacter sp. strain DS2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-06-24 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.873 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 79.530, 79.530, 108.970 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 13.740 - 2.400 |
R-factor | 0.2328 |
Rwork | 0.231 |
R-free | 0.26190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2qpz |
RMSD bond length | 0.011 |
RMSD bond angle | 1.344 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | d*TREK |
Refinement software | PHENIX (dev_1839) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 56.270 | 2.210 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.063 | |
Number of reflections | 10628 | |
<I/σ(I)> | 17.28 | |
Completeness [%] | 99.9 | 99.3 |
Redundancy | 8.6 | 8.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 277 | 200mM calcium chloride, 100mM HEPES pH 7.5, 25-28% PEG 400 |