5BNN
Crystal structure of human enterovirus D68 in complex with 6'SL
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 14-BM-C |
Synchrotron site | APS |
Beamline | 14-BM-C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-08-23 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9787 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 325.600, 347.100, 356.400 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.410 - 2.320 |
Rwork | 0.246 |
R-free | 0.24700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4mw8 |
RMSD bond length | 0.006 |
RMSD bond angle | 1.400 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Refinement software | CNS (1.3) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.400 |
High resolution limit [Å] | 2.320 | 5.000 | 2.320 |
Rmerge | 0.175 | 0.071 | 0.722 |
Rmeas | 0.220 | 0.087 | 0.911 |
Rpim | 0.130 | 0.049 | 0.545 |
Total number of observations | 1016005 | ||
Number of reflections | 526043 | ||
<I/σ(I)> | 4.6 | ||
Completeness [%] | 61.4 | 49.7 | 65.3 |
Redundancy | 1.9 | 2.3 | 1.8 |
CC(1/2) | 0.990 | 0.567 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 0.1 M Sodium Acetate (pH 4.5), 3.5 M Sodium Formate |