5BNC
Structure of heme binding protein MSMEG_6519 from Mycobacterium smegmatis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-04-08 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.9537 |
Spacegroup name | P 61 |
Unit cell lengths | 62.100, 62.100, 301.406 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.770 - 2.250 |
R-factor | 0.1869 |
Rwork | 0.185 |
R-free | 0.22980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2arz |
RMSD bond length | 0.014 |
RMSD bond angle | 1.766 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.770 | 43.770 | 2.320 |
High resolution limit [Å] | 2.250 | 9.000 | 2.250 |
Rmerge | 0.097 | 0.028 | 0.637 |
Rpim | 0.046 | 0.013 | 0.417 |
Total number of observations | 163129 | 2605 | 9067 |
Number of reflections | 31095 | ||
<I/σ(I)> | 14.1 | 44.4 | 1.9 |
Completeness [%] | 99.9 | 99.2 | 99.2 |
Redundancy | 5.2 | 5.2 | 3.2 |
CC(1/2) | 0.996 | 0.999 | 0.516 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291.15 | 0.2M Magnesium Acetate, 0.1M Hepes, 23% PEG3350 |