5BMN
Crystal Structure of APO form of Phosphoglucomutase from Xanthomonas citri
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-09-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.96861 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 43.980, 55.180, 174.700 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.096 - 1.270 |
R-factor | 0.166 |
Rwork | 0.165 |
R-free | 0.18690 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2k2y |
RMSD bond length | 0.007 |
RMSD bond angle | 1.118 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 52.620 | 52.620 | 1.300 |
High resolution limit [Å] | 1.270 | 5.680 | 1.270 |
Rmerge | 0.041 | 0.024 | 0.643 |
Number of reflections | 112663 | ||
<I/σ(I)> | 20 | ||
Completeness [%] | 99.6 | 99.4 | 97.8 |
Redundancy | 6.3 | 5.8 | 5.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 291 | 12.5 % PEG 1000, 12.5 % PEG 3350, 12.5 % MPD, 30 mM MgCl2, 30 mM CaCl2, 100 mM MOPS/HEPES pH 7.5 |