5B4J
Crystal structure of I86D mutant of phycocyanobilin:ferredoxin oxidoreductase in complex with biliverdin (data 3)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-04-25 |
Detector | RIGAKU JUPITER 210 |
Wavelength(s) | 0.800 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 70.823, 95.861, 42.378 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 10.000 - 1.050 |
Rwork | 0.139 |
R-free | 0.16770 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 4qcd |
RMSD bond length | 0.015 |
RMSD bond angle | 0.032 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | SHELXL-97 |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 56.970 | 1.090 |
High resolution limit [Å] | 1.050 | 1.050 |
Rmerge | 0.378 | |
Number of reflections | 134801 | |
<I/σ(I)> | 9.7 | |
Completeness [%] | 99.5 | 99.3 |
Redundancy | 4.2 | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | sodium citrate, sodium chloride, Tris |