5B1N
DHp domain structure of EnvZ from Escherichia coli
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-07-15 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 0.9000 |
Spacegroup name | P 62 |
Unit cell lengths | 38.510, 38.510, 84.508 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 19.255 - 1.330 |
R-factor | 0.1784 |
Rwork | 0.177 |
R-free | 0.21060 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3zrx |
RMSD bond length | 0.016 |
RMSD bond angle | 1.623 |
Data reduction software | SCALA |
Data scaling software | SCALA (3.2.25) |
Phasing software | PHASER (2.5.5) |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.258 | 42.258 | 1.400 |
High resolution limit [Å] | 1.200 | 4.210 | 1.330 |
Rmerge | 0.052 | 0.030 | 0.418 |
Rmeas | 0.057 | ||
Rpim | 0.022 | 0.014 | 0.176 |
Total number of observations | 104426 | 1865 | 15234 |
Number of reflections | 15966 | ||
<I/σ(I)> | 18.1 | 28.5 | 4.5 |
Completeness [%] | 97.9 | 65.3 | 100 |
Redundancy | 6.5 | 5.3 | 6.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.9 | 293 | 1.1-1.3 M sodium/potassium phosphate |