5B0W
Crystal structure of the 11-cis isomer of pharaonis halorhodopsin in the absence of halide ions
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SPRING-8 BEAMLINE BL38B1 |
| Synchrotron site | SPring-8 |
| Beamline | BL38B1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2015-06-11 |
| Detector | RAYONIX MX225HE |
| Wavelength(s) | 1 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 154.320, 97.930, 101.530 |
| Unit cell angles | 90.00, 128.67, 90.00 |
Refinement procedure
| Resolution | 15.000 - 1.700 |
| Rwork | 0.202 |
| R-free | 0.21540 |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.450 |
| Data reduction software | SCALA |
| Data scaling software | SCALA |
| Phasing software | MOLREP |
| Refinement software | CNS (1.21) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.700 | 1.790 |
| High resolution limit [Å] | 1.700 | 1.700 |
| Rmerge | 0.059 | 0.393 |
| Number of reflections | 125077 | |
| <I/σ(I)> | 11.7 | 2.4 |
| Completeness [%] | 96.8 | 81.8 |
| Redundancy | 3.2 | 2.4 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6 | 288 | A mixture solution containing 3mg/ml halorhodopsin, 1M ammonium sulfate, 0.1M NaCl, 0.1 M sodium citrate, and 5.7mg/ml nonylglucoside was concentrated by the sitting-drop vapor diffusion method. Before data collection, the crystal was soaked in an alkaline solution containing no halide ions, illuminated with red light, and then soaked in a solution at pH 7. |






